Welcome to TrajPy’s documentation!

Contents:

• Introduction
  • Graphical User Interface
  • Synthetic Dataset
• Installation
  • TrajPy
  • Graphical User Interface (trajpy-ui)
  • Development version
  • Dependencies
• Tutorial
  • Simple Example
  • Accessing Features
  • Training data
• Synthetic Data Generator
  • Overview
  • Diffusion Regimes
    • Anomalous Diffusion
      • anomalous_diffusion()
    • Normal Diffusion
      • normal_diffusion()
    • Confined Diffusion
      • confined_diffusion()
    • Superdiffusion (Directed Motion)
      • superdiffusion()
  • Saving Trajectories to Disk
    • save_to_file()
  • Usage Examples
    • Anomalous Diffusion
    • Normal Diffusion
    • Confined Diffusion
    • Superdiffusion (Directed Motion)
  • Parameter Guidelines
  • Pre-built Dataset
  • API Reference
    • anomalous_diffusion()
    • confined_diffusion()
    • normal_diffusion()
    • normal_distribution()
    • save_to_file()
    • superdiffusion()
    • weierstrass_mandelbrot()
• Publications
  • Citing TrajPy
  • Publications using TrajPy
    • Journal Articles
    • Dissertations
• Module Documentation
  • TrajPy
    • Trajectory
      • Trajectory.__init__()
      • Trajectory.anisotropy_()
      • Trajectory.anomalous_exponent_()
      • Trajectory.asymmetry_()
      • Trajectory.compute_features()
      • Trajectory.confinement_probability_()
      • Trajectory.efficiency_()
      • Trajectory.fractal_dimension_()
      • Trajectory.frequency_spectrum_()
      • Trajectory.gaussianity_()
      • Trajectory.green_kubo_()
      • Trajectory.gyration_radius_()
      • Trajectory.kurtosis_()
      • Trajectory.msd_ensemble_averaged_()
      • Trajectory.msd_ratio_()
      • Trajectory.msd_time_averaged_()
      • Trajectory.stationary_velocity_correlation_()
      • Trajectory.straightness_()
      • Trajectory.velocity_()
      • Trajectory.velocity_description_()
  • Trajectory Generator
    • anomalous_diffusion()
    • confined_diffusion()
    • normal_diffusion()
    • normal_distribution()
    • save_to_file()
    • superdiffusion()
    • weierstrass_mandelbrot()

Indices and tables

• Index

• Module Index

• Search Page